- tdwg-humboldt - lists.tdwg.org

IPT walkthrough tomorrow
by Paula Zermoglio 27 Jan '21

27 Jan '21

Hi everyone, We have set the time for the *IPT tour *for those interested: Tomorrow, *28 Jan, 8am EST*. I will not be sending invites through the calendar, so please take note. Please join here: https://us02web.zoom.us/j/81902614169?pwd=My9DUkxHQ2pnZUROSXlJd2hnbHJ6QT09 Meeting ID: 819 0261 4169 Passcode: 392795 I set aside 2hs for it, just in case, but let's try to keep it to just one for everyone's sake :) Of course, everyone is invited to join! Best, paula

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Humboldt Core Task Group Meeting Wed 20 Jan 8am EST
by Yanina Sica 26 Jan '21

26 Jan '21

Hi all! Hope you are all fine and healthy! We are meeting tomorrow (Wed 20 Jan) to catch up on the work that the different subgroups have been advancing on. This is the link for the meeting tomorrow: https://yale.zoom.us/j/96750659891 All the best! Yanina V. Sica, PhD Data Manager | Map of Life Yale University pronouns: she/her/hers <https://www.avast.com/sig-email?utm_medium=email&utm_source=link&utm_campai…> Virus-free. www.avast.com <https://www.avast.com/sig-email?utm_medium=email&utm_source=link&utm_campai…> <#DAB4FAD8-2DD7-40BB-A1B8-4E2AA1F9FDF2>

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subgroups and more!
by Yanina Sica 12 Jan '21

12 Jan '21

Hi all! I am just writing to make sure that we all know what our next steps and meeting schedule are. We decided to tackle the tasks in different subgroups. Below you can find them, I just included some names as references. Please correct me if I am wrong! Please contact each other if you are interested in a particular task. If possible send your meeting times to the whole group so we can all keep track and get involved. Subgroups: - *HC Terms and definitions discussion* (see progress here <https://docs.google.com/spreadsheets/d/1OmnO6e3iJESsv-JI--dtwMDoekmng-LVrgQ…> ) - Yanina Sica - Paula Zermoglio - Kate Ingenloff - Next meeting: Friday 15, 1 pm EST - *Survey Methods Definition and controlled vocabulary generation* (see progress here <https://docs.google.com/spreadsheets/d/1ojS1gRk5MJZ5OWYuaXaGt0oFn3J-JPvpHT-…>) - Steve Baskaufs - Peter Brenton - Paula Zermoglio - John Wieczorek - Next meeting (if any): *complete* - *Testing datasets in GBIF IPT?* - Tim Robertson - John Wieczorek - Peter Brenton - Erlend B. Nilsen - Robert D Stevenson - Next meeting (if any): *complete* Meeting schedule: - Wednesday January 20 2021 → large meeting! GBIF IPT walk through: - Submit your availability here <https://www.when2meet.com/?10652426-dMndv> if you are interested. Unfortunately, we are having some issues to find a time that suits all so we might have to offer a second walk-thought. Cheers!! Yanina V. Sica, PhD Data Manager | Map of Life Yale University pronouns: she/her/hers

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GBIF IPT walk-through
by Yanina Sica 08 Jan '21

08 Jan '21

Hi all! As you know Paula volunteered to lead a walk-through for the GBIF IPT for anyone interested. Please *complete your availability* here <https://www.when2meet.com/?10652426-dMndv> so we can schedule a date. You will need to fill in your name and sign in (no password needed). All the best! Yanina V. Sica, PhD Data Manager | Map of Life Yale University pronouns: she/her/hers

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Humboldt Core Task Group Meeting Wed 6 Jan 8am EST
by Yanina Sica 06 Jan '21

06 Jan '21

Hi all! I hope 2021 brought happiness and health to all of you! I am sorry for sending this email so close to the meeting time but I am still a bit slow in this first week of the year! The plan was to meet (Wed 6 Jan) to talk about the work done by John and Tim and discuss next steps. This is the link for the meeting tomorrow: https://yale.zoom.us/j/96750659891 Hope you can make it, All the best! Yanina V. Sica, PhD Data Manager | Map of Life Yale University pronouns: she/her/hers

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sample protocol and ontology for marine macro algae
by Robert Stevenson 06 Jan '21

06 Jan '21

Dear all Here is an example<https://docs.google.com/document/d/15gOTUsITD1BuBFD0qeGHrrp4uHN4V1fWGXI5NXN…> for us to consider This protocol is from my colleague Jarrett Byrnes and his kelp group. The team started as an NCEAS group and subsequently morphed into an IPBES group. Jarrett thinks other IPBES groups would have similar problems with definitions and methods. If this document and the kelp team's data sets prove useful, we can see about contacting other IPBES groups. Seagrass, mangroves, and saltmarsh communities would be obvious targets Rob Robert D Stevenson Associate Professor Department of Biology UMass Boston

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sample protocol and ontology for marine macro algae
by Rob Stevenson 05 Jan '21

05 Jan '21

Dear all Here is an example <https://docs.google.com/document/d/15gOTUsITD1BuBFD0qeGHrrp4uHN4V1fWGXI5NXN…> for us to consider This protocol is from my colleague Jarrett Byrnes and his kelp group. The team started as an NCEAS group and subsequently morphed into an IPBES group. Jarrett thinks other IPBES groups would have similar problems with definitions and methods. If this document and the kelp team's data sets prove useful, we can see about contacting other IPBES groups. Seagrass, mangroves, and saltmarsh communities would be obvious targets Rob -- Robert D Stevenson Associate Professor Department of Biology UMass Boston

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Re: [tdwg-humboldt] Survey types used in BioCollect platform so far
by Tim Robertson 22 Dec '20

22 Dec '20

Thanks Peter, I’ve moved that onto the issue here, and tried to change formatting: https://github.com/tdwg/hc/issues/3 Can you please verify that the largest nested concept is 3 deep (I assumed “-“ meant nesting)? Are there definitions for these concepts please? Thanks, Tim From: tdwg-humboldt <tdwg-humboldt-bounces(a)lists.tdwg.org> on behalf of "Brenton, Peter (NCMI, Black Mountain)" <Peter.Brenton(a)csiro.au> Reply to: The Humboldt Core Task Group discussion <tdwg-humboldt(a)lists.tdwg.org> Date: Wednesday, 16 December 2020 at 15.09 To: "tdwg-humboldt(a)lists.tdwg.org" <tdwg-humboldt(a)lists.tdwg.org> Subject: [tdwg-humboldt] Survey types used in BioCollect platform so far Great meeting everyone, Here is our current list of survey types: Air quality - Fixed sensor,Air quality - Mobile sensor,Bat survey - Echolocation recorder,Bat survey - Harp trapping,Beach profile survey - Emery method,Beach profile survey - Optical method,Bird survey - Distance sample (along transect),Bird survey - Fixed-area,Bird survey - Fixed-time,Bird survey - Fixed-time & Fixed-area,Bird survey - Mist netting,Fauna survey - 2-Ha track plot method,Fauna survey - Active search,Fauna survey - Aerial distance sampler method,Fauna survey - Cage trapping,Fauna survey - Call playback,Fauna survey - Camera trapping,Fauna survey - Elliot trapping,Fauna survey - Funnel trapping,Fauna survey - Hair tubes,Fauna survey - Nest box monitoring,Fauna survey - Pitfall trapping,Fauna survey - Scat survey,Fauna survey - Spotlight search,Fauna survey - Strip transect aerial survey,Fauna survey - Turtle trapping,Fish survey - Electrofishing,Fish survey - Set net/trap,Fish survey - Sweep netting,Insect survey - Black light,Insect survey - Malaise trap,Insect survey - Baited trap,Insect survey - Glue trap,Insect survey - Sweep netting,Plant propagation - Systematic seed propagation batch testing with different techniques,Vegetation condition assessment - Biocondition (QLD),Vegetation condition assessment - BioMetric (NSW),Vegetation condition assessment - Bushland Condition (SA),Vegetation condition assessment - Expert elicitation,Vegetation condition assessment - Habitat Hectares (VIC),Vegetation condition assessment - LEBRA,Vegetation condition assessment - TasVeg (TAS),Vegetation condition assessment - Post fire - Simple Photo Protocol,Vegetation survey - General transect & plot,Vegetation survey - Intensive inventory,Vegetation survey - Step point method,Water quality - Standardised physical/chemical attribute measurements,Water quality - Macroinvertebrate survey - SIGNAL2 method,Water quality - Macroinvertebrate survey - ALT method,Riparian condition assessment - Rapid Appraisal of Riparian Condition (RARC) [cid:image001.png@01D6D3C7.EF4EA670] Peter Brenton Manager, Applications Atlas of Living Australia National Collections & Marine Infrastructure, CSIRO Clunies Ross Street, Acton ACT 2601 | GPO Box 1700, Canberra ACT 2601 E peter.brenton(a)csiro.au | T +61 2 6246 5813 | M +61 436 630 766 www.ala.org.au<../../../Local/Microsoft/Windows/Temporary%20Internet%20Files/Content.Outlook/JCZSR1WG/www.ala.org.au> | www.csiro.au/Research/Collections<../../../Local/Microsoft/Windows/Temporary%20Internet%20Files/Content.Outlook/JCZSR1WG/www.csiro.au/Research/Collections> Check out our BioCollect tool at http://www.ala.org.au/biocollect/ CSIRO acknowledges the Traditional Owners of the lands that we live and work on across Australia and pays its respect to Elders past and present. PLEASE NOTE The information contained in this email may be confidential or privileged. Any unauthorised use or disclosure is prohibited. If you have received this email in error, please delete it immediately and notify the sender by return email. Thank you. To the extent permitted by law, CSIRO does not represent, warrant and/or guarantee that the integrity of this communication has been maintained or that the communication is free of errors, virus, interception or interference. Please consider the environment before printing this email.

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Survey types used in BioCollect platform so far
by Brenton, Peter (NCMI, Black Mountain) 16 Dec '20

16 Dec '20

Great meeting everyone, Here is our current list of survey types: Air quality - Fixed sensor,Air quality - Mobile sensor,Bat survey - Echolocation recorder,Bat survey - Harp trapping,Beach profile survey - Emery method,Beach profile survey - Optical method,Bird survey - Distance sample (along transect),Bird survey - Fixed-area,Bird survey - Fixed-time,Bird survey - Fixed-time & Fixed-area,Bird survey - Mist netting,Fauna survey - 2-Ha track plot method,Fauna survey - Active search,Fauna survey - Aerial distance sampler method,Fauna survey - Cage trapping,Fauna survey - Call playback,Fauna survey - Camera trapping,Fauna survey - Elliot trapping,Fauna survey - Funnel trapping,Fauna survey - Hair tubes,Fauna survey - Nest box monitoring,Fauna survey - Pitfall trapping,Fauna survey - Scat survey,Fauna survey - Spotlight search,Fauna survey - Strip transect aerial survey,Fauna survey - Turtle trapping,Fish survey - Electrofishing,Fish survey - Set net/trap,Fish survey - Sweep netting,Insect survey - Black light,Insect survey - Malaise trap,Insect survey - Baited trap,Insect survey - Glue trap,Insect survey - Sweep netting,Plant propagation - Systematic seed propagation batch testing with different techniques,Vegetation condition assessment - Biocondition (QLD),Vegetation condition assessment - BioMetric (NSW),Vegetation condition assessment - Bushland Condition (SA),Vegetation condition assessment - Expert elicitation,Vegetation condition assessment - Habitat Hectares (VIC),Vegetation condition assessment - LEBRA,Vegetation condition assessment - TasVeg (TAS),Vegetation condition assessment - Post fire - Simple Photo Protocol,Vegetation survey - General transect & plot,Vegetation survey - Intensive inventory,Vegetation survey - Step point method,Water quality - Standardised physical/chemical attribute measurements,Water quality - Macroinvertebrate survey - SIGNAL2 method,Water quality - Macroinvertebrate survey - ALT method,Riparian condition assessment - Rapid Appraisal of Riparian Condition (RARC) [cid:image003.png@01D6D411.37B68790] Peter Brenton Manager, Applications Atlas of Living Australia National Collections & Marine Infrastructure, CSIRO Clunies Ross Street, Acton ACT 2601 | GPO Box 1700, Canberra ACT 2601 E peter.brenton(a)csiro.au | T +61 2 6246 5813 | M +61 436 630 766 www.ala.org.au<../../../Local/Microsoft/Windows/Temporary%20Internet%20Files/Content.Outlook/JCZSR1WG/www.ala.org.au> | www.csiro.au/Research/Collections<../../../Local/Microsoft/Windows/Temporary%20Internet%20Files/Content.Outlook/JCZSR1WG/www.csiro.au/Research/Collections> Check out our BioCollect tool at http://www.ala.org.au/biocollect/ CSIRO acknowledges the Traditional Owners of the lands that we live and work on across Australia and pays its respect to Elders past and present. PLEASE NOTE The information contained in this email may be confidential or privileged. Any unauthorised use or disclosure is prohibited. If you have received this email in error, please delete it immediately and notify the sender by return email. Thank you. To the extent permitted by law, CSIRO does not represent, warrant and/or guarantee that the integrity of this communication has been maintained or that the communication is free of errors, virus, interception or interference. Please consider the environment before printing this email.

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