Index Fungorum LSID Authority

Thu Mar 9 14:16:21 CET 2006

I have finished setting up an LSID authority for Index Fungorum names.
For more details about this task, see the wiki at
http://wiki.gbif.org/guidwiki/wikka.php?wakka=LSIDResolverForTaxonNamesIF
An example lsid is urn:lsid:indexfungorum.org:Names:213645.  More LSIDs
can be found by searching the indexfungorum names on the IF web site
http://www.indexfungorum.org.

The authority currently serves up exactly the same basic xml that is
served by the IF web service (see
http://www.indexfungorum.org/Names/IndexFungorumLSIDs.htm).  The same
xml is returned for both the metadata and the data at this stage - the
LSID data will change later to something that we decide is the
"unchangeable set of bytes" for a particular taxon name.
As the return format is not RDF, this means that the metadata and data
returned is not viewable by using IE Launchpad.  However if you use
launchpad it saves the metadata to the cache directory and you can view
this file.  The plugin for Firefox seems a little more verbose and
allows you to save the data and metadata to a location of your choice
when downloading the LSID info.  Go to
http://sourceforge.net/project/showfiles.php?group_id=130827 for Firefox
plugin.

The next step will be to return a more usefule format - RDF based on
the TCS schema seems to be the desired option.  I'm not sure how to
approach this if anyone has any suggestions (ie the RDF version of TCS)?
 As it is a prototype, I could add "dummy" RDF predicates for the TCS
elements required for an IF name, eg
"http://www.tdwg.org/schemas/tcs/1.01/ScientificName/Simple", or create
real temprary ones such as "urn:lsid:indexfungorum.org:predicates:123"
specifically for IF.  Anyone with more RDF experience have any
suggestions?

Kevin Richards

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<DIV>I have finished setting up an LSID authority for Index Fungorum =
names.&nbsp; For more details about this task, see the wiki at <A =
href=3D"http://wiki.gbif.org/guidwiki/wikka.php?wakka=3DLSIDResolverForTaxo=
nNamesIF">http://wiki.gbif.org/guidwiki/wikka.php?wakka=3DLSIDResolverForTa=
xonNamesIF</A></DIV>
<DIV>An example lsid is urn:lsid:indexfungorum.org:Names:213645.&nbsp; =
More LSIDs can be found by searching the indexfungorum names on the IF web =
site <A href=3D"http://www.indexfungorum.org/Names/IndexFungorumLSIDs.htm">=
http://www.indexfungorum.org</A>.</DIV>
<DIV>&nbsp;</DIV>
<DIV>The authority currently serves up exactly the same basic xml that is =
served by the IF web service (see <A href=3D"http://www.indexfungorum.org/N=
ames/IndexFungorumLSIDs.htm">http://www.indexfungorum.org/Names/IndexFungor=
umLSIDs.htm</A>).&nbsp; The same xml is returned for both the metadata and =
the data at this stage - the LSID&nbsp;data will change later to something =
that we decide is the "unchangeable set of bytes" for a particular taxon =
name.</DIV>
<DIV>As the return format is not RDF, this means that the metadata and =
data returned is not viewable by using IE Launchpad.&nbsp; However if you =
use launchpad it saves the metadata to the cache directory and you can =
view this file.&nbsp; The plugin for Firefox seems a little more verbose =
and allows you to save the data and metadata to a location of your choice =
when downloading the LSID info.&nbsp; Go to=20
<DIV><A href=3D"http://sourceforge.net/project/showfiles.php?group_id=3D130=
827">http://sourceforge.net/project/showfiles.php?group_id=3D130827</A>&nbs=
p;for Firefox plugin.</DIV></DIV>
<DIV>&nbsp;</DIV>
<DIV>The next step will be to return a more usefule format - RDF based on =
the TCS schema seems to be the desired option.&nbsp; I'm not sure how to =
approach this if anyone has any suggestions (ie the RDF version of =
TCS)?&nbsp; As it is a prototype, I could add "dummy" RDF predicates for =
the TCS elements required for an IF name, eg <A href=3D"http://www.tdwg.org=
/schemas/tcs/1.01/ScientificName/Simple">"http://www.tdwg.org/schemas/tcs/1=
.01/ScientificName/Simple</A>", or create real temprary ones such as =
"urn:lsid:indexfungorum.org:predicates:123" specifically for IF.&nbsp; =
Anyone with more RDF experience have any suggestions?</DIV>
<DIV>&nbsp;</DIV>
<DIV>Kevin Richards</DIV>
<DIV>&nbsp;</DIV>
<DIV>&nbsp;</DIV></BODY></HTML>

++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++<BR>
WARNING: This email and any attachments may be confidential and/or<BR>
privileged. They are intended for the addressee only and are not to be read,<BR>
used, copied or disseminated by anyone receiving them in error.  If you are<BR>
not the intended recipient, please notify the sender by return email and<BR>
delete this message and any attachments.<BR>
<BR>
The views expressed in this email are those of the sender and do not<BR>
necessarily reflect the official views of Landcare Research.  <BR>
<BR>
Landcare Research<BR>
http://www.landcareresearch.co.nz<BR>
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