[tdwg-content] proposed term: dwc:verbatimScientificName

Peter DeVries pete.devries at gmail.com
Thu Dec 9 17:48:07 CET 2010


So basically what you are saying is that the entire NCBI taxonomy database
as well as the ebird database cannot output the required format.

- Pete

On Thu, Dec 9, 2010 at 9:44 AM, Richard Pyle <deepreef at bishopmuseum.org>wrote:

> I think this is **exactly** the right solution. I would go further to make
> it clear that:
>
>
>
> -          verbatimScientificName is the required field (with
> scientificName and scientificNameAuthorship as optional)
>
> -          When a source database maintains separate fields  corresponding
> to scientificName and scientificNameAuthorship, they should be concatenated
> (with a single space between them) to form the required
> verbatimScientificName
>
>
>
> Aloha,
>
> Rich
>
>
>
> *From:* tdwg-content-bounces at lists.tdwg.org [mailto:
> tdwg-content-bounces at lists.tdwg.org] *On Behalf Of *David Remsen (GBIF)
> *Sent:* Wednesday, December 08, 2010 6:10 AM
> *To:* tdwg-content at lists.tdwg.org List
> *Subject:* [tdwg-content] proposed term: dwc:verbatimScientificName
>
>
>
> Markus and I wanted to try to consolidate the issues related to the current
> use and definition of scientificName that have been the focus of last weeks
> discussion in as simple a way as we can and leave it with a simple proposal
> which we will add to the issue tracking on the project site.
>
>
>
> 1. We propose that a new term, dwc:verbatimScientificName carry the
> existing definition for dwc:scientificName and
>
> 2. dwc:scientificName follow the more accepted convention that is better
> represented by the earlier proposed definition for Canonical Name
>
>
>
> The intention is to enable data publishers to distinguish unparsed, complex
> scientific names from more cleanly separated scientific name data.   This
> will relieve consumers of these data from testing each instance of a name
> for one of these two conditions.
>
>
>
> Here are the definitions for the two existing terms that have been part of
> the discussion:
>
>
>
> *dwc:scientificName * - The full scientific name, with authorship and date
> information if known. When forming part of an Identification, this should be
> the name in lowest level taxonomic rank that can be determined. This term
> should not contain identification qualifications, which should instead be
> supplied in the IdentificationQualifier term.
>
>
>
> *dwc:scientificNameAuthorship* - The authorship information for the
> scientificName formatted according to the conventions of the applicable
> nomenclaturalCode.
>
>
>
> Here are terms and definitions used in the following 5 source data
> configurations we came up with.   They don't have to be exact for this
> purpose.
>
>
>
> *canonical name* - The nomenclatural components of a scentific name
> without authorship information.
>
> *authorship* - the authorship information that follows a scientific name
>
> *verbatim name*  - the verbatim text stored in a source database when it
> differs from or combines the two definitions above.  This is a bit more
> broad than the def for scientificName.
>
>
>
> We identified the following configurations in a source database and how
> they would be mapped to the existing terms.  In cases 4 and 5 we also
> propose how we would map these were there a 3rd available term (called
> 'mapping b:')
>
>
>
> When a source database contains:
>
>
>
> 1.  canonical names only
>
>
>
> Mapping:  canonical name -> dwc:scientificName
>
>
>
> 2. canonical name and authorship in two fields
>
>
>
> Mapping: canonical name -> dwc:scientificName /
> authorship->dwc:scientificNameAuthorship
>
>
>
> 3. verbatim name only
>
>
>
> Mapping:  verbatim name -> dwc:scientificName
>
>
>
> 4. all three: canonical name, authorship, and verbatim name in 3 diff.
> columns
>
>
>
> Mapping a:  verbatim name -> dwc:scientificName  /
> authorship->dwc:scientificNameAuthorship
>
>
>
> Mapping b:  canonical name -> dwc:scientificName  /
> authorship->dwc:scientificNameAuthorship / verbatim name ->
> dwc:verbatimScientificName
>
>
>
> 5. a mix of canonical and verbatim names in a single column
>
>
>
> Mapping a:  verbatim name + canonical names -> dwc:scientificName
>
>
>
> Mapping b:  verbatim name + canonical names -> dwc:verbatimScientificName
>
>
>
> Summary - with the current two terms are left with no choice but to support
> both canonical and verbatim names in a single term, which makes consuming
> these data difficult.
>
>
>
> We propose that a new term, dwc:verbatimScientificName carry the existing
> definition for dwc:scientificName and that dwc:scientificName follow the
> more accepted convention that is better represented by the definition for
> Canonical Name
>
>
>
> Best,
>
> David Remsen / Markus Döring
>
>
>
>
>
>
>
> _______________________________________________
> tdwg-content mailing list
> tdwg-content at lists.tdwg.org
> http://lists.tdwg.org/mailman/listinfo/tdwg-content
>
>


-- 
---------------------------------------------------------------
Pete DeVries
Department of Entomology
University of Wisconsin - Madison
445 Russell Laboratories
1630 Linden Drive
Madison, WI 53706
TaxonConcept Knowledge Base <http://www.taxonconcept.org/> / GeoSpecies
Knowledge Base <http://lod.geospecies.org/>
About the GeoSpecies Knowledge Base <http://about.geospecies.org/>
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