Dear Dave,

This sounds like a great opportunity.

That said, I little part of me dies when I read "infrastructure" documents. The focus is invariably on technologies rather than questions, and I don't think people actually want "infrastructure", they want things to help them do the things they're trying to do (as opposed to cool things that could be built for them).

I've made some comments on the topics, but rather than pollute your own outline with my grumpiness, I've made a copy and scribbled some thoughts on that. The annotated document is at https://docs.google.com/document/d/1VLvysjbm6IUhceAEgkAWSQ9yc71YK-9_48bPNZAC... or http://bit.ly/H17nLs if that link gets mangled.

Regards

Rod

On 29 Mar 2012, at 12:31, Dave Roberts wrote:

Dear Colleague,

we need funding to pursue biodiversity research, but funding is under huge pressure. One area for which there is potential is in biodiversity informatics because we are witnessing a paradigm shift in the way we handle data. Now it is expected that data will be openly accessible, presenting huge opportunities if only the data can be found when needed.

There is a strong need for a community voice to present the funders with a set of priorities. We have successfully built a number of infrastructural components, such as INSDC, GBIF, Catalogue of Life, but we lack the bridges to allow users to integrate elements from these resources to address a simple question.

With the encouragement of the European Commission, we are launching a consultation to write a White Paper on biodiversity informatics. We have made a list of potential chapters with a brief outline of what they might cover here:

http://is.gd/WhitePaperChapters

This document is a public Google doc. The approach we propose is to ask for volunteers to lead the development of each chapter.

• If you can identify a new chapter, please add it to the Chapters list

• If you are prepared to lead a chapter, put your name against the chapter, open a new public googledoc and past the link into the chapters list.

• Please do not create chapters dedicated to specific disciplines, such as molecular biology, because there is no way to prioritise one discipline against another.

• Three funded EU projects will administer the production of the white paper. agINFRA, BioVeL and ViBRANT will supply. We will edit the chapters for continuity and will produce an executive summary.

• If you are able to join the editorial group, email one of the organisers. We expect this to work by self-nomination.

The European Commission would like access to such a community view in forming the funding calls under Horizon2020. It is possible that other funders may pay similar attention. It makes no sense to do this over just Europe. We recognise that biodiversity is global and we need global priorities.

Timetable 27 April: initial draft chapters; propose group meetings with dates in May

1 June: refined chapters merged by editorial group

22 June: draft executive summary and edited chapters

July: public meeting

1st Sept: Publication of white paper

This timetable is tight because the Horizon2020 funding calls will be drafted in the last quarter of 2012. To have real benefit in Europe, we need to move quickly.

Organising Group: Alex Hardisty <hardistyAR_at_cardiff_dot_ac_dot_uk> Dave Roberts <dmr_at_nomencurator_dot_org> Hannu Saarenmaa <hannu_dot_saarenmaa_at_uef_dot_fi> Norman Morrison <norman_at_nmorrison_dot_info> Peter van Tienderen <P_dot_H_dot_vanTienderen_at_uva_dot_nl> -- Dr D.McL. Roberts, Tel: +44 (0)20 7942 5086 Dept. Zoology, The Natural History Museum, Cromwell Road, London SW7 5BD Great Britain Email: dmr@nomencurator.org Web page: http://scratchpads.eu http://www.nhm.ac.uk/research-curation/projects/euk-extreme/ -- "The intent of [bureaucratic] language is not to deceive, it is to preserve one's interpretive latitude so that if context changes a new more approporiate meaning can be attached to the language already used." Matthew Crawford (The case for working with your hands, Penguin 2010) --

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