Dear all
Just a reminder that we will be meeting today at the usual time of 14:00 UTC with the aim to get the information elements in place.
Join Zoom Meeting
https://us02web.zoom.us/j/85039169478?pwd=QzIvam8xRy9CdFVtdEh3MDU3TFJydz09
Meeting ID: 850 3916 9478
Passcode: 912779
We have submitted a presentation for the TDWG/SPNHC conference which will be part of the following symposium https://www.tdwg.org/conferences/2024/sessions/#sym17, organised by Wouter and Anton.
It would be good to also consider additional publications that we should be considering for MIDS to raise awareness.
Best wishes
Elspeth
Dr Elspeth M Haston
Deputy Herbarium Curator
Royal Botanic Garden Edinburgh<https://rbge.org.uk/>
20a Inverleith Row, Edinburgh EH3 5LR, Scotland, United Kingdom
@emhaston | Google Scholar<https://scholar.google.com/citations?user=T3LgDsoAAAAJ&hl=en&oi=ao> | https://orcid.org/0000-0001-9144-2848
Search our Herbarium collections online at http://data.rbge.org.uk/herb
The Royal Botanic Garden Edinburgh<https://www.rbge.org.uk> is a charity registered in Scotland (No SC007983) | Support Us<https://www.rbge.org.uk/support-us>
This notice applies to this email and to any other email subsequently sent by anyone at RBGE and appearing in the same chain of email correspondence. References below to "this email" should be read accordingly. This e-mail and its attachments (if any) are confidential, may be protected by copyright and may be privileged. If you receive this e-mail in error, notify us immediately by reply e-mail, delete it and do not use, disclose or copy it. Unless we expressly say otherwise in this e-mail, this e-mail does not create, form part of, or vary, any contractual or unilateral obligation. No liability is accepted for viruses and it is your responsibility to scan attachments (if any). Where this e-mail is unrelated to the business of RBGE, the opinions expressed within this e-mail are the opinions of the sender and do not necessarily constitute those of RBGE. RBGE emails are filtered and monitored.
Hi all,
As trailed in a previous meeting, I've finished putting together and deploying a little web app which uses the GBIF API to calculate MIDS scores. You can access it here: https://naturalhistorymuseum.github.io/gamc and the source is here: https://github.com/naturalhistorymuseum/gamc.
From the home page just search and select your GBIF occurrence dataset, the app then runs some calculations by querying the GBIF API a few (~25) times, and then you'll see a couple of charts showing your dataset's record counts against the 4 MIDS levels as well as a more detailed breakdown of record counts by MIDS element. For example, here's the NHM London's breakdown<https://naturalhistorymuseum.github.io/gamc/dashboard/7e380070-f762-11e1-a4…>.
For more info about how it works, check out the about page: https://naturalhistorymuseum.github.io/gamc/about. Specifically of interest to this group will be the how does it work<https://naturalhistorymuseum.github.io/gamc/about#how-does-it-work> section and the caveats<https://naturalhistorymuseum.github.io/gamc/about#caveats>.
Any and all feedback welcome, including suggestions for changes (particularly around the mapping where we are somewhat limited, again see the caveats). The primary goal of this tool at the moment is to help people understand and explore their own MIDS scores, but when GBIF implement MIDS in their systems I fully expect it to become redundant. Additionally, it may be worth exploring a GeoCASe API based version of this too (and it would be pretty trivial to add I expect), though this may have limited usefulness given the discussion we had in the last meeting about the general lack of availability of datasets that cover all earth science disciplines.
All the best,
Josh
----------------------------------------------------------------------------------------------------------------------------------------
Josh Humphries (he/him) | Head of Science Data Platforms | Digital, Data & Informatics | NHM London
Email: j.humphries(a)nhm.ac.uk
For information, we received this very positive e-mail from Cecilie confirming GBIF support for MIDS and interest in implementation.
Elspeth
________________________________
From: Cecilie Svenningsen <csvenningsen(a)gbif.org<mailto:csvenningsen@gbif.org>>
Sent: 05 July 2024 09:27
To: Elspeth Haston <EHaston(a)rbge.org.uk<mailto:EHaston@rbge.org.uk>>
Cc: Tim Robertson <trobertson(a)gbif.org<mailto:trobertson@gbif.org>>; Marie Grosjean <mgrosjean(a)gbif.org<mailto:mgrosjean@gbif.org>>
Subject: MIDS in GBIF - follow-up after TAG meeting
You don't often get email from csvenningsen(a)gbif.org<mailto:csvenningsen@gbif.org>. Learn why this is important<https://aka.ms/LearnAboutSenderIdentification>
Dear Elspeth,
Thank you for the presentation on the MIDS progress at the TDWG Technical Architecture Group meeting last week.
I wanted to follow up with you because you mentioned that GBIF had declared interest in implementing MIDS when ready, but I was not aware of the discussions at the time of the meeting and could not provide any feedback. I have now talked with people in the Secretariat who are more familiar with MIDS (cc in this email) and can confirm that GBIF would be interested in including MIDS to support community requests for the implementation. Specifically, we think it could be of value to implement in GRSciColl at the collection level. But before we can investigate implementing MIDS, we want to see a finalized specification of the calculation rules in place, that will be maintained externally to GBIF, and we hope TDWG can support those efforts.
I understand you will have some follow-up discussions with TDWG after the meeting, but can I ask what your impressions are of how the standardization process in TDWG is going for the MIDS task group outputs?
Kind regards
Cecilie
Cecilie Svenningsen (csvenningsen(a)gbif.org<mailto:csvenningsen@gbif.org>)
Data Administrator, PhD
GBIF Secretariat
DENMARK
URL: http://www.gbif.org<http://www.gbif.org/>
The Royal Botanic Garden Edinburgh<https://www.rbge.org.uk/> is a charity registered in Scotland (No SC007983) | Support Us<https://www.rbge.org.uk/support-us>
This notice applies to this email and to any other email subsequently sent by anyone at RBGE and appearing in the same chain of email correspondence. References below to "this email" should be read accordingly. This e-mail and its attachments (if any) are confidential, may be protected by copyright and may be privileged. If you receive this e-mail in error, notify us immediately by reply e-mail, delete it and do not use, disclose or copy it. Unless we expressly say otherwise in this e-mail, this e-mail does not create, form part of, or vary, any contractual or unilateral obligation. No liability is accepted for viruses and it is your responsibility to scan attachments (if any). Where this e-mail is unrelated to the business of RBGE, the opinions expressed within this e-mail are the opinions of the sender and do not necessarily constitute those of RBGE. RBGE emails are filtered and monitored.
Dear all
Just a reminder that we will be meeting today at the usual time of 14:00 UTC (about 15 minutes). We will aim to talk through the recent meeting with the TDWG TAG to determine the options for MIDS in light of the feedback.
Hope to see you there.
Best wishes
Elspeth
Dr Elspeth M Haston
Deputy Herbarium Curator
Royal Botanic Garden Edinburgh<https://rbge.org.uk/>
20a Inverleith Row, Edinburgh EH3 5LR, Scotland, United Kingdom
@emhaston | Google Scholar<https://scholar.google.com/citations?user=T3LgDsoAAAAJ&hl=en&oi=ao> | https://orcid.org/0000-0001-9144-2848
Search our Herbarium collections online at http://data.rbge.org.uk/herb
The Royal Botanic Garden Edinburgh<https://www.rbge.org.uk> is a charity registered in Scotland (No SC007983) | Support Us<https://www.rbge.org.uk/support-us>
This notice applies to this email and to any other email subsequently sent by anyone at RBGE and appearing in the same chain of email correspondence. References below to "this email" should be read accordingly. This e-mail and its attachments (if any) are confidential, may be protected by copyright and may be privileged. If you receive this e-mail in error, notify us immediately by reply e-mail, delete it and do not use, disclose or copy it. Unless we expressly say otherwise in this e-mail, this e-mail does not create, form part of, or vary, any contractual or unilateral obligation. No liability is accepted for viruses and it is your responsibility to scan attachments (if any). Where this e-mail is unrelated to the business of RBGE, the opinions expressed within this e-mail are the opinions of the sender and do not necessarily constitute those of RBGE. RBGE emails are filtered and monitored.
