Excellent!

What is the status of mapping the remaining fields here:

  <extension encoding="UTF-8" fieldsTerminatedBy="\t" linesTerminatedBy="\n" fieldsEnclosedBy="" ignoreHeaderLines="1" rowType="http://rs.gbif.org/terms/1.0/DNADerivedData">

    <files>

      <location>dnaderiveddata.txt</location>

    </files>

    <coreid index="0" />

    <field index="1" term="https://w3id.org/gensc/terms/MIXS:0000012"/>

    <field index="2" term="https://w3id.org/gensc/terms/MIXS:0000013"/>

    <field index="3" term="https://w3id.org/gensc/terms/MIXS:0000014"/>

    <field index="4" term="https://w3id.org/gensc/terms/MIXS:0000044"/>

    <field index="5" term="https://w3id.org/gensc/terms/MIXS:0000090"/>

    <field index="6" term="http://rs.gbif.org/terms/pcr_primer_forward"/>

    <field index="7" term="http://rs.gbif.org/terms/pcr_primer_reverse"/>

    <field index="8" term="http://rs.gbif.org/terms/pcr_primer_name_forward"/>

    <field index="9" term="http://rs.gbif.org/terms/pcr_primer_name_reverse"/>

    <field index="10" term="http://rs.gbif.org/terms/pcr_primer_reference"/>

    <field index="11" term="http://rs.gbif.org/terms/dna_sequence"/>

  </extension>


Some are in MIxS but not as 1:1; e.g. MIxS has a combined field for primers whereas many databases separate these into two. Also it looks like the URIs like http://rs.gbif.org/terms/pcr_primer_forward don't resolve?

On Wed, Sep 29, 2021 at 7:44 AM Chris H <only1chunts@gmail.com> wrote:

Good news! Thank you Thomas for sharing.

I am forwarding this onto the GSC-MIxS group as I’m sure they will be pleased to see real-world usage of the work we do.

 

Thanks

Chris

 

 

From: Thomas Stjernegaard Jeppesen
Sent: 29 September 2021 15:09
To: dwc-mixs@lists.tdwg.org
Subject: [dwc-mixs] Use of the MIxS-based DWC extension

 

Hi All

I just wanted to let you know that GBIF now starts to see incoming  data using the MIxS-based DNA derived data extension for DwC.

A few examples:

  1. https://www.gbif.org/dataset/e0b59ee7-19ae-4eb0-9217-33317fb50d47
    1. Example occurrence record: https://www.gbif.org/occurrence/3357191905 (scroll to the bottom to see the MIxS / DNA data)
  2. https://www.gbif.org/dataset/9e29a2fe-d780-48a8-a93f-9ce041f9202f
    1. Example occurrence record: https://www.gbif.org/occurrence/3356905303
  1. https://www.gbif.org/dataset/040c5662-da76-4782-a48e-cdea1892d14c
    1. Example occurrence: https://www.gbif.org/occurrence/2979635351

 

Best wishes

 

Thomas Stjernegaard Jeppesen

Web developer

orcid.org/0000-0003-1691-239X

 

Global Biodiversity Information Facility

Universitetsparken 15, 2100 København Ø

www.gbif.org | www.catalogueoflife.org/

 

 

 

--
You received this message because you are subscribed to the Google Groups "gensc-cig" group.
To unsubscribe from this group and stop receiving emails from it, send an email to gensc-cig+unsubscribe@googlegroups.com.
To view this discussion on the web visit https://groups.google.com/d/msgid/gensc-cig/E6030553-7655-47AA-AE08-D98DDF4B7BCD%40hxcore.ol.